Канал: Hubbard Center for Genome Studies (HCGS)

Genome annotation and inferring function

Genome annotation and inferring function

Sequencing and assembling a genome

Sequencing and assembling a genome

Data structures and conventions

Data structures and conventions

Generation of genomic data: NGS sequencing

Generation of genomic data: NGS sequencing

Principles of Genomics

Principles of Genomics

Introduction to Genomics and Bioinformatics modules

Introduction to Genomics and Bioinformatics modules

Module 9: Redirecting Standard Out (pipe)

Module 9: Redirecting Standard Out (pipe)

Module 8: Search and Manipulate Files (grep)

Module 8: Search and Manipulate Files (grep)

Module 12: .bashrc

Module 12: .bashrc

Module 13: File Permissions

Module 13: File Permissions

Module 14: Shell Scripts

Module 14: Shell Scripts

Module 15: Nohup

Module 15: Nohup

Module 16: Trim Reads w/ Trimmomatic

Module 16: Trim Reads w/ Trimmomatic

Module 17: Genome Assembly w/ SPAdes

Module 17: Genome Assembly w/ SPAdes

Module 18: Assembly Metrics w/ QUAST

Module 18: Assembly Metrics w/ QUAST

Module 19: Annotate a Genome w/ Prokka

Module 19: Annotate a Genome w/ Prokka

Module 10: Wildcards and Globbing

Module 10: Wildcards and Globbing

Module 11: Variables and Parameter Substitutions

Module 11: Variables and Parameter Substitutions

Module 7a: Edit and View Files w/ Nano

Module 7a: Edit and View Files w/ Nano

Module 6: Odds and Ends

Module 6: Odds and Ends

Module 5: Move, Copy, and Delete

Module 5: Move, Copy, and Delete

Module 4: Moving Around

Module 4: Moving Around

Module 3: Pathways and Directories

Module 3: Pathways and Directories

Module 2: Finding Help

Module 2: Finding Help

Module 1: Anatomy of a Command

Module 1: Anatomy of a Command

How to Use SSH to Connect to a Remote Server

How to Use SSH to Connect to a Remote Server