Alignment-Free

Wei Wang: "Alignment-free RNASeq Analysis"

Institute for Pure & Applied Mathematics (IPAM)

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Alignment-Free Local Sequence Comparison: Statistics and Algorithms | Michael Waterman

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Alignment-free distances with spaced seeds

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Effects of Spaced k-mers on Alignment-Free Genotyping - Hartmut Häntze - HiTSeq - ISMB/ECCB 2023

ISCB

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"Fast Alignment-Free Similarity Estimation By Tensor Sketching" - RECOMB 2021

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AFconverge: alignment-free phylogenetic method for... - Maria Chikina - EvolCompGen - ISMB/ECCB 2023

ISCB

Alignment-free distances with spaced seeds (variable alignment length)

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MIA: Debora Marks, Alignment-free models for protein and antibody design; Aaron Kollasch

Broad Institute

kTypeR – accurate and efficient alignment-free HLA genotyping using nanopore sequencing - S.Klasberg

Oxford Nanopore Technologies

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Lecture 10: End-gap-free alignment and whole-genome shotgun sequencing

UC Davis Academics