In this video, we will use the web_summary.html file output from Cell Ranger to assess the quality of an example single cell gene expression data. You can also read the analysis guide on this page: [ Ссылка ]
0:00 Welcome
1:08 Access the Summary File
1:46 Navigating the Web Summary
3:14 Key Metrics
5:33 Sequencing Metrics
7:25 Mapping Metrics
8:56 Barcode Rank Plot
13:10 Cells Metrics
13:55 Sample Information
14:46 Gene Expression Analysis Tab
18:42 Bonus: Comparisons of Results With Default vs. Force-Cells
