In this video we will to the blast analysis to find out the lncRNAs. Long non-coding RNAs (lncRNAs) have been shown to play important roles in plant development, stress responses, and adaptation. The identification and characterization of lncRNAs in plants is a critical step towards understanding their regulatory functions in various biological processes. Plant-specific experimental and computational methods have been developed for the detection and annotation of lncRNAs, including RNA sequencing, comparative genomics, and functional assays such as CRISPR/Cas9-mediated gene editing. In this context, the title "Unraveling the Mysteries of Long Non-Coding RNA: Methods and Techniques for Identification and Characterization in Plants" emphasizes the significance of these methods in advancing our knowledge of lncRNAs in plants and their potential applications in crop improvement and biotechnology.
Database 1 Link: [ Ссылка ]
Cantata Link: [ Ссылка ]
AlnC database Link: [ Ссылка ]
We use #AlnC to find out the lncRNA in an organism. #AlnC is a database of lncRNAs identified a total of 10,855,598 lncRNAs, annotated in 809 RNA-seq samples of 682 flowering plants by using machine learning approach previously described by Singh et al., 2017..
How were these lncRNAs discovered?
How to find #2D_structure of lncRNA?
#RNA
#lncRNA
#Genome
lncRNA 2D structure
Long Non-Coding RNA Part 01: finding the lncRNA #AlnC
Теги
lncRNAmRNAmiRNAsiRNApiRNAcircRNAsnoRNAsnRNAscaRNAtRNArRNAncRNARNA polymeraseRNA splicingRNA editingRNA sequencingRNA interferenceRNA processingRNA methylationRNA stabilityRNA transportRNA localizationRNA turnoverRNA surveillanceRNA foldingRNA structureRNA-protein interactionsribosometranslationtranscriptiongene expressionRNA regulationRNA-binding proteinsRNA chaperonesRNA granulesRNA localization signalsbioinformatics