This is a basic hands-on tutorial to download sequencing data from SRA NCBI using SRA Toolkit.
In this video, I have demonstrated how to download and configure SRA Toolkit and download sequencing data associated with GSE183947.
Link to GSE183947:
[ Ссылка ]
Link to download SRA Toolkit :
[ Ссылка ]
Link to install SRA Toolkit:
[ Ссылка ]
Link to configure SRA Toolkit:
[ Ссылка ]
Link to additional resources:
1. [ Ссылка ]
2. [ Ссылка ]
Chapters:
0:00 Intro
2:19 Get SRR# ids
5:34 Download SRA Toolkit
7:50 Configure SRA Toolkit
10:00 Download fastq files
Show your support and encouragement by buying me a coffee:
[ Ссылка ]
To get in touch:
Website: [ Ссылка ]
Github: [ Ссылка ]
Email: khushbu_p@hotmail.com
#bioinformagician #bioinformatics #sra #ncbi #genomics #beginners #hands-on #tutorial #howto #omics #research #biology #GEO #rnaseq #ngs
![](https://i.ytimg.com/vi/zE851fWCYQg/maxresdefault.jpg)